Epistemis

Human Microbiota, the Microbiome, and Dysbiosis — Medical Microbiology

Microbiology · Basic Sciences

How it begins

Composition by ecological niches, eubiosis, competitive exclusion, SCFA metabolism, Clostridioides difficile infection and fecal microbiota transplantation. The human microbiome, shotgun metagenomics, biogeographic profiles (skin, mouth, intestine, vagina), bacterial metabolites (SCFA acetate, propionate, butyrate), dysbiosis, Clostridioides difficile, gut-brain axis, fecal microbiota transplantation...

What it covers

  1. 1. Core Concepts: Microbiota, Microbiome and Eubiosis
  2. 2. Composition of the Microbiota by Anatomical Site
  3. 3. Physiological, Immunological and Metabolic Functions of the Microbiota
  4. 4. Dysbiosis and Its Clinical Consequences
  5. 5. Clostridioides difficile Infection as the Prototypical Model of Dysbiosis
  6. 6. Therapeutic Interventions: Probiotics and Fecal Microbiota Transplantation (FMT)
  7. 7. Microbiome Metabolomics: Short-Chain Fatty Acids (SCFA) and Epithelial Signaling
  8. 8. Pathology of Dysbiosis and Fecal Microbiota Transplantation (FMT)
  9. 9. Advanced Clinical Cases on the Microbiome and Dysbiosis
  10. 10. The Gut-Brain Axis and Fecal Microbiota Transplantation

The complete study guide is in the app

This page summarizes the outline. The full interactive study guide —with high-yield diagrams, clinical tables, and board review cases— can be read inside Epistemis, completely offline and ad-free.

Subject
Microbiology
Category
Basic Sciences
Type
Study Guide
Sections
10
Reviewed
2026-09-18
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